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Papers
Papers: Thesis Manuscripts Print E-mail

Masters and Ph.D. Thesis

Below are the Masters and Ph.D. theses by students of the Remote Sensing Lab. They are listed in chronological order. 

 

 
Papers: Publications 2008 Print E-mail

Bronwyn Cahill, Oscar Schofield, Robert Chant, John Wilkin, Eli Hunter, Scott Glenn, and Paul Bissett 2008 Dynamics of turbid buoyant plumes and the feedbacks on near-shore biogeochemistry and physics , GEOPHYSICAL RESEARCH LETTERS, VOL. 35, L10605, doi:10.1029/2008GL033595, 2008 

Connolly, J., Knight, C., Oliver, M., Tomanek, L., Beaulieu, J., Moline, M. 2008. Correlated evolution of cell volume and genome size in Diatoms (Bacillariophyceae) , Journal of Phycology 44, 124-131 


Schofield , O ., Kohut, J., Glenn, S. M. 2008. Evolution of coastal observing networks. Sea Technology. 49: 31-36.

L. Alex Kahl, Assaf Vardi, Oscar Schofield 2008. Effects of phytoplankton physiology on export flux. Marine Ecology Progress Series.Vol. 354: 3–19, 2008 doi: 10.3354/meps07333

Chant, R. J., S. M. Glenn, E. Hunter, J. Kohut, R. F. Chen, R. W. Houghton, J. Bosch, and O. Schofield 2008. Bulge Formation of a Buoyant River Outflow. Journal Geophysical Research 113, C01017, doi:10.1029/2007JC004100.

Castelao, R., Glenn, S., Schofield, O., Chant, R., Wilkin, J., Kohut 2008. Seasonal evolution of hydrographic fields in the central Middle Atlantic Bight from glider observations . Geophysical Research Letters doi:10.1029/2007GL032335

 
Papers: Publications 2007 Print E-mail
Castelao, R., Barth, J. A. 2007. The role of wind stress curl in jet seperation at a Cape. Journal of Physical Oceanography 37: 2652-2671.

Hunt, H., M.J. Maltais, D. Fugate and R.J. Chant 2007. Spatial and temporal variability in juvenile bivalve dispersal: effects of sediment transport and flow regime. Marine Ecology Progress Series. 352 145-150 doi: 10.3354/meps07131.

Francis, J.A. and E. Hunter, 2007: Changes in the fabric of the Arctic’s greenhouse blanket, Environ. Res. Lett., 2, doi:10.1088/1748-9326/2/4/045011.

Finkel, Z. V., Sebbo, J., Feist-Burkhardt, S., Irwin, A. J., Katz, M. E., Schofield , O ., Young, J. R., Falkowski, P. G. 2007. A universal driver of macroevolutionary change in the size of marine phytoplankton over the Cenozoic. Proceedings of the National Academy of Sciences 104(51): 20416-20420 . doi/10.1073/pnas.0709381104.

Oliver, M. J., M. Moline, C. Mobley, L. K. Sundman, and O. Schofield 2007. Bioluminescence in a complex coastal environment: 2. Prediction of bioluminescent source depth from spectral water-leaving radiance, Journal of Geophysical Research doi:10.1029/2007JC004136.

Moline, M. A. , M. J. Oliver, C. D. Mobley, L. Sundman, S. M. Blackwell, T. Bergmann, W. P. Bissett, J. Case, E. H. Raymond, Schofield , O . 2007. Bioluminescence in a complex coastal environment I: Temporal dynamics of night-time water-leaving radiance . Journal of Geophysical Research. 112, DOI:10.1029/2007JC004138.

Litchman E., Klausmeier C. A., Schofield O., Falkowski P. G. 2007. The role of functional traits and trade-offs in structuring phytoplankton communities: scaling from cellular to ecosystem level. Ecology Letters. 10: 1170-1181.

Francis, J., Hunter, E. 2007. Drivers of declining sea ice in the Arctic winter: A tale of two seas. Geophysical Research Letters Vol. 34, L17503, doi:10.1029/2007GL030.

Finkel, Z. V., Quigg, A. S., Chiambi, R., Schofield , O ., Falkowski, P. G. 2007. Phylogenetic diversity in Cd:P regulation by marine phytoplankton. Limnology and Oceanography 52(3): 1131-1138.

Schofield, O., Kohut, J., Aragon , D., Creed, L., Graver, J., Haldeman, C., Kerfoot, J., Roarty, H., Jones, C., Webb, D., Glenn, S. M. 2007. Slocum Gliders: Robust and ready. Journal of Field Robotics. 24(6): 1-14. DOI: 10:1009/rob.20200.

Valle-Levinson, A., K. Holderied, C. Li, and R. J. Chant 2007. Subtidal flow structure at the turning region of a wide outflow plume, Journal of Geophysical Research 112, C04004, doi:10.1029/2006JC003746.

Oliver, M., Petrov, D., Ackerley, D., Falkowski, P. G. Schofield , O.2007. The mode and tempo of genome size evolution in eukaryotes. Journal of Genome Research. doi/10.1101/gr.6096207.

Schofield, O., Bosch, J., Glenn, S. M., Kirkpatrick, G., Kerfoot, J., Moline, M., Oliver, M., Bissett, W. P. 2007. Bio-optics in integrated ocean observing networks: potential for studying harmful algal blooms. In Real Time Coastal Observing Systems for Ecosystem Dynamics and Harmful Algal Blooms. Babin, M,. Roesler, C. and J. J. Cullen (Eds). UNESCO, Paris. 85-108.

Bissett, W. P., R. Arnone, S. Debra, D. Dye, G. Kirkpatrick, C. Mobley,O. Schofield, O. 2007. The integration of ocean color remote sensing with coastal nowcast/forecast simulations of Harmful Algal Blooms (HABs).  In Real Time Coastal Observing systems for ecosystems dynamics and harmful algal blooms.  Babin, M. And Cullen, J. J. (Eds) UNESCO, Paris. 695-732.

Edson, J., T. Crawford, J. Crescenti, T. Farrar, N. Frew, G. Gerbi, C. Helmis, T. Hristov, D. Khelif, A. Jessup, H. Jonsson, M. Li, L. Mahrt, W. McGillis, A. Plueddemann, L. Shen, E. Skyllingstad, T. Stanton, P. Sullivan, J. Sun, J. Trowbridge, D. Vickers, S. Wang, Q. Wang, R. Weller, J. Wilkin, A.J. Williams III, D. Yu and C. Zappa (2007) The Coupled Boundary Layers and Air-Sea Transfer Experiment in Low Winds, Bulletin of the American Meteorolgical Society, 88(3), 341-356.

Hunter, E., R. Chant, L. Bowers, S. Glenn, and J. Kohut (2007), Spatial and temporal variability of diurnal wind forcing in the coastal ocean, Geophysical Research Letters, 34, L03607, doi:10.1029/2006GL028945.

Valle-Levinson, A, K. Holderied, C. Li and R.J. Chant (2007) Subtidal flow structure at the turning region of a wide outflow plume. Journal of Geophysical Research 112, C04004, doi: 10.1029/2006JC003746.
 
Papers: Publications 2006 Print E-mail
Craig, Susanne E., S. Lohrenz, L. Zhongping, K. Mahoney, G. Kirkpatrick, O. Schofield, and R. Steward (2006) Use of hyperspectral remote sensing reflectance for detection and assessment of the harmful alga, Karenia brevis. Applied Optics, Vol. 45, No. 21, 20 July 2006.

Fennel, K., J. Wilkin, J. Levin, J. Moisan, J. O'Reilly, and D. Haidvogel (2006) Nitrogen cycling in the Middle Atlantic Bight: Results from a three-dimensional model and implications for the North Atlantic nitrogen budget. Global Biogeochemical Cycles, 20, GB3007, doi: 10.1029/2005GB002456.

Finkel, Z.V., A. Quigg, J.A. Raven, J.R. Reinfelder, O.E. Schofield, P.G. Falkowski (2006) Irradiance and the elemental stoichiometry of marine phytoplankton. Limnol. Oceanogr. 51(6), 2690-2701.

Frazer, T.K., S.R. Keller, O. Schofield, S.M. Glenn, J. Kohut, R.J. Chant, M. Oliver, J.R. Reinfelder, M.A. Moline, M. Zhou, R.F. Chen (2006) Coastal Ocean Observatories Enable Biological Investigations in a Buoyant Plume. Marine Technology Society, Boston Meeting, September 2006.

Glenn, S.M., O.M. Schofield, R. Chant, J. Kohut, J. McDonnell, S.D. McLean (2006) The Leo-15 Coastal Cabled Observatory - Phase II for the Next Evolutionary Decade of Oceanography. SSC06 - Scientific Submarine Cable 2006.
Glenn, S.M., O. Schofield, R. Chant, J. Kohut, H. Roarty, J. Bosch, L. Bowers, D. Gong and J. Kerfoot(2006) Wind-driven Response of the Hudson River Plume and Its Effect on Dissolved Oxygen Concentrations US/EU Baltic International Symposium, Lithuania 2006.

Glenn, S.M., R. Chant, J. Kohut, J. Reinfelder, O. Schofield, J. McDonnell (2006) Extended Abstract - Opening a Window to the Sea: The Potential of the Ocean Observatories for Education. Marine Technology Society, Boston meeting, September 2006

He, R., and J.L. Wilkin (2006) Barotropic tides on the southeast New England shelf: A view from a hybrid data assimilation modeling approach. Journal of Geophysical Research, 111, C08002, doi: 2005JC003254.

Iglesias-Rodriguez, M.D., O. Schofield, J. Batley, L. Medlin, and P. Hayes. (2006) Intraspecific Genetic Diversity in the Marine Coccolithophore Emiliania Huxleyi (Prymnesiophyceae): The Use of Microsatellite Analysis in Marine Phytoplankton Population Studies. Journal of Phycology, 42, 526-536, doi: 10.1111/j.1529-8817.2006.00231.x

Irwin, A., Z. Finkel, O. Schofield, P. Falkowski. 2006. Scaling-up from nutrient physiology to the size-structure of phytoplankton communities. Journal of Plankton Research, 28: 1-13.

Kohut, J. (2006) Extended Abstract - A Regional HF Radar Pilot Product: Serving IOOS needs in the Mid-Atlantic Bight Marine Technology Society, Boston Meeting, September 2006

Kohut, J.T., H.J. Roarty and S.M. Glenn (2006) Characterizing Observed Environmental Variability witih HF Doppler Radar Surface Current Mappers and Acoustic Dopler Current Profilers: Environmental Variability in the Coastal Ocean, IEEE Journal of Oceanic Engineering, Vol. 31, No. 4, October 2006, 876-884.

Roarty, H.J., and M.S. Bruno (2006) Laboratory Measurements of Bed Load Sediment Transport Dynamics. Journal of Waterway, Port, Coastal and Ocean Engineering, Vol. 132, No. 3, 199-211.

Schofield, O., L. Bowrs, G. Fotti, S. Glenn, D. Gong, A. Kahl, J. Kohut, M. Oliver, J. Wilkin, R. Chant (2006) Studying the Dynamics and Biological Significance of the Hudson River Using an Ocean Observatory. Marine Technology Society, Boston Meeting, September 2006.

Schofield, O., J. Kerfoot, K. Mahoney, M. Moline, M. Oliver, S. Lohrenz, an G. Kirkpatrick (2006) Vertical migration of the toxic dinoflagellate Karenia brevis and the impact on ocean optical properties. Journal of Geophysical Research, Vol. II, C06009, doi: 10.1029/2005JC003115, 2006.

Wilkin, J. and W. Zhang (2006) Modes of mesoscale sea surface height and temperature variability in the East Australian Current, Journal of Geophysical Research, 112, C01013, doi: 10.1029/2006JC003590.

Wolfe-Simon, F., A. Trey, V. Starovoytov, J.R. Reinfelder, O. Schofield, P.G. Falkowski (2006) The locatlization and role of MnSOD in diatoms. Plant Pysiology DOI: 10.1104/pp.106.088963
 
Papers: Publications 2005 Print E-mail
Bissett, W.P., R. Arnone, S. DeBra, D.A. Dieterle, D. Dye, G. Kirkpatrick, O. Schofield, G.A. Vargo (2005) Predicting the optical properties of the West Florida Shelf: Resolving the potential impacts of a terresetria boundary condition on the distribution of colored dissolved and particulate matter. Marine Chemistry, doi: 10.1016/j.marchem.2004.09.007: 1-35.

Creed, E.L., S. Glenn, O.M. Schofield, H. Barrier, R.F. Petrecca, J.A. Dobarro, S.D. McLean, A.H. Barnard, K.M. Brown, R.S. Adams, S. Feener (2005) LEO-15 Observatory - The Next Generation Oceans 2005.

**Finkel, Z.V., M.E. Katz, J.D. Wright, O. Schofield, P.G. Falkowski (2005) Climatically-driven macroevolutionary patterns in the size of marine diatoms over the Cenozoic. Proceedings of National Academy of Sciences, 102 (25): 2927-2932.

Glenn, S.M., O.M. Schofield, R. Chant, J. Kohut, J. McDonnell (2005) Educational Needs in the Changing Field of Operational Oceanography: Training the People that will Sustain Munk's 1+1=3 Scenario Oceans 2005.

**Jiang, L., O. Schofield, P.G. Falkowski. (2005) Adaptive evolution of phytoplankton cell size. American Naturalist. 166 (4): 496-505.

Jones, C., E. Creed, S. Glenn, J. Kerfoot, J. Kohut, C. Mudgal, O. Schofield (2005) Slocum Gliders - A Component of Operational Oceanography Autonomous Undersea Systems Institute Symposium Proceedings 2005.

Kerfoot, J., G. Kirkpatrick, S. Lohrenz, K. Mahoney, O. Schofield (2005) Vertical Migration of a Karenia brevis Bloom: Implications for Remote Sensing of Harful Algal Blooms, in: Harmful Algae 2002: Proceedings of the 10th International Conference of Harfmul Algae, Steidinger, K.A., J.H. Landserber, C.R. Tomas, and G.A. Vargo (eds) 2004. Florida Fish and Wildlife Commission, Florida Institute of Oceanography and Intergovernmental Oceanographic Commission of UNESCO, St. Petersburg, Florida, USA. 279-283.

McDonnell, J, S. Lichtenwalner, and J. Kohut (2005) What does a Data Management and Translation Facility Look Like? A View from the Rutgers University Coastal Ocean Observation Laboratory (RUCOOL). This paper was originally written for the ORION Education and Public Outreach Advisory Committee (EPAC)

O. Schofield, C. Jeandel. (2005) Science, friends and great times: International Ocean Research Conference in Paris. Oceanography 18 (3): 62-65.

O. Schofield, J. Kohut, and S. Glenn (2005) The New Jersey Shelf Observing System: Using an Ocean Observatory to Track Plumes, Particulates and People in the Coastal Ocean. Sea Technology Vol. 46, No. 9: 15-21.

**Wolfe, F. D. Grzebyk, O. Schofield, P.G. Falkowski (2005) The role and evolution of superdioxide dismutases in algae. Journal of Phycology DOI: 10.1111/j.-1529-8817.2005.00086: 1-13.
 
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